SEMA6B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEMA6B mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SEMA6B-associated genes across cancer lineages are eEF2, eIF4E, and FoxM1. Each is linked with SEMA6B in more than 2 cancer types. Because this analysis shows association rather than direction, both SEMA6B-to-partner and partner-to-SEMA6B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by SEMA6B-low versus SEMA6B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SEMA6B→partner) and Y-score (partner→SEMA6B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.398+3.459.004.00533
UCECeIF4E →+0.206+3.183.012.00932
UCECFoxM1 →+0.233+2.502.021.00232
UCECmTOR_pS2448 →-0.168-2.787.004.00332
UCECNotch1 →+0.167+1.584.002.03632
UCECASNS →+0.306+2.000.031.03032
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

eEF2 by SEMA6B expression — UCEC

Box plot of eEF2 in SEMA6B-low vs SEMA6B-high samples in UCEC.

Explore this box plot interactively →

Exploration