SELENOO

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SELENOO RNA expression is significantly associated with the protein abundance of many other proteins, with 10,599 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SELENOO-associated proteins across cancer lineages are ZBED4_S624, XRCC5, and XRCC6. Each is linked with SELENOO in more than 3 cancer types. Because this analysis shows association rather than direction, both SELENOO-to-partner and partner-to-SELENOO results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SELENOO versus ZBED4_S624 in OV, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SELENOO→partner) and Y-score (partner→SELENOO) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVZBED4_S624 →+0.809+0.809.003.00234
GBMXRCC5 →+0.244+0.325<.001<.00133
GBMXRCC6 →+0.254+0.354<.001<.00133
LSCCSEC24A →-0.244-0.391<.001<.00133
PDACCDK17 →-0.294-0.186<.001.00333
CCRCCCDV3 →-0.285-0.318.004.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,599 associations by consensus.

SELENOO vs ZBED4_S624 — OV

Per-sample scatter of SELENOO vs ZBED4_S624 in OV (Pearson r = 0.43).

Explore this scatter interactively →

Exploration