SELENOO

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SELENOO mutation is significantly associated with the total protein of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SELENOO-associated genes across cancer lineages are Caspase-7-cleavedD198, MEK1, and Rad50. Each is linked with SELENOO in more than 2 cancer types. Because this analysis shows association rather than direction, both SELENOO-to-partner and partner-to-SELENOO results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by SELENOO-low versus SELENOO-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SELENOO→partner) and Y-score (partner→SELENOO) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.713+2.321.002.03333
COADMEK1 →+0.272+3.025.008.01932
UCECRad50 →-0.263-2.415.007.00332
UCECEGFR_pY1068 →-0.279-2.584.005.01031
UCECp27_pT198 →+0.088+2.321.042.03431
UCECp62 Lck ligand →+0.432+3.459<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

Caspase-7-cleavedD198 by SELENOO expression — UCEC

Box plot of Caspase-7-cleavedD198 in SELENOO-low vs SELENOO-high samples in UCEC.

Explore this box plot interactively →

Exploration