SEH1L

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SEH1L mutation is significantly associated with the RNA expression of many other genes, with 1,440 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SEH1L-associated genes across cancer lineages are RNA5SP138, MIR548AI, and LINC02079. Each is linked with SEH1L in more than 1 cancer types. Because this analysis shows association rather than direction, both SEH1L-to-partner and partner-to-SEH1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP138 grouped by SEH1L-low versus SEH1L-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SEH1L→partner) and Y-score (partner→SEH1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCARNA5SP138 →+0.274+7.640<.001.00932
UCECMIR548AI →+0.154+3.736<.001.00931
UCECLINC02079 →+0.101+2.904<.001.00931
UCECAARSD1 →+0.379+3.332.003.00531
UCECASB16-AS1 →+0.450+3.329.002.00531
UCECCIRBP-AS1 →+0.884+3.732<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,440 associations by consensus.

RNA5SP138 by SEH1L expression — BLCA

Box plot of RNA5SP138 in SEH1L-low vs SEH1L-high samples in BLCA.

Explore this box plot interactively →

Exploration