SEC31B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SEC31B mutation is significantly associated with the RNA expression of many other genes, with 924 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SEC31B-associated genes across cancer lineages are RFPL3, PARP2, and PPEF2. Each is linked with SEC31B in more than 1 cancer types. Because this analysis shows association rather than direction, both SEC31B-to-partner and partner-to-SEC31B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RFPL3 grouped by SEC31B-low versus SEC31B-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SEC31B→partner) and Y-score (partner→SEC31B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaRFPL3 →+0.054+4.339<.001.00232
LARGE_INTESTINEPARP2 →+0.548+3.169.002.00932
LARGE_INTESTINEPPEF2 →+0.024+2.222.001.00232
LARGE_INTESTINEMBOAT4 →+0.134+3.404<.001<.00132
LARGE_INTESTINEHBG1 →+0.054+1.691.003.00932
LARGE_INTESTINEADSS2 →+0.506+3.321<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 924 associations by consensus.

RFPL3 by SEC31B expression — BLOOD_Leukemia

Box plot of RFPL3 in SEC31B-low vs SEC31B-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration