SDR16C5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SDR16C5 mutation is significantly associated with the total protein of many other genes, with 35 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SDR16C5-associated genes across cancer lineages are Rab11, Rad50, and STAT3_pY705. Each is linked with SDR16C5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SDR16C5-to-partner and partner-to-SDR16C5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Rab11 grouped by SDR16C5-low versus SDR16C5-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SDR16C5→partner) and Y-score (partner→SDR16C5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRab11 →-0.145-2.000.030.02732
UCECRad50 →-0.248-3.000.034.03632
UCECSTAT3_pY705 →-0.591-3.584<.001.00232
SKCMCDK1_pY15 →+0.440+2.237<.001.00532
UCECEGFR →-0.258-3.169<.001.01931
UCECJNK2 →+0.218+2.459.023.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 35 associations by consensus.

Rab11 by SDR16C5 expression — SKCM

Box plot of Rab11 in SDR16C5-low vs SDR16C5-high samples in SKCM.

Explore this box plot interactively →

Exploration