SDR16C5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SDR16C5 mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SDR16C5-associated genes across cancer lineages are TCF21, TACR3, and OR6C76. Each is linked with SDR16C5 in more than 1 cancer types. Because this analysis shows association rather than direction, both SDR16C5-to-partner and partner-to-SDR16C5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TCF21 grouped by SDR16C5-low versus SDR16C5-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SDR16C5→partner) and Y-score (partner→SDR16C5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTCF21 →+0.011+4.705<.001.00331
BLOOD_LeukemiaTACR3 →+0.038+5.060<.001.00131
BLOOD_LeukemiaOR6C76 →+0.018+4.539<.001.00731
BLOOD_LeukemiaOR10T2 →+0.707+4.276<.001.00731
BLOOD_LeukemiaVSTM2B →+0.104+4.874<.001.00231
BLOOD_LeukemiaOR10R2 →+1.349+4.551.004.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

TCF21 by SDR16C5 expression — BLOOD_Leukemia

Box plot of TCF21 in SDR16C5-low vs SDR16C5-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration