SDCBP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SDCBP RNA expression is significantly associated with the protein abundance of many other proteins, with 10,363 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SDCBP-associated proteins across cancer lineages are DNAJC19, SH3BGRL3, and IMMT. Each is linked with SDCBP in more than 5 cancer types. Because this analysis shows association rather than direction, both SDCBP-to-partner and partner-to-SDCBP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SDCBP versus DNAJC19 in OV, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SDCBP→partner) and Y-score (partner→SDCBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVDNAJC19 →-0.570-0.535<.001.00136
OVSH3BGRL3 →+0.382+0.594.001.00335
BRCAIMMT →-0.260-0.566<.001<.00135
GBMAPOBR →+0.458+0.316<.001<.00135
GBMARPC5 →+0.408+0.589<.001<.00135
GBMRIN3 →+0.375+0.430<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,363 associations by consensus.

SDCBP vs DNAJC19 — OV

Per-sample scatter of SDCBP vs DNAJC19 in OV (Pearson r = -0.36).

Explore this scatter interactively →

Exploration