SDCBP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SDCBP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,803 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible SDCBP-associated GO terms across cancer lineages are Negative regulation of protein localization to centrosome, Regulation of L-glutamate import across plasma membrane, and Regulation of Fc receptor mediated stimulatory signaling pathway. Each is linked with SDCBP in more than 12 cancer types. Because this analysis shows association rather than direction, both SDCBP-to-partner and partner-to-SDCBP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of protein localization to centrosome grouped by SDCBP-low versus SDCBP-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SDCBP→partner) and Y-score (partner→SDCBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCNegative regulation of protein localization to centrosome →+0.155+1.056.002.001213
LIVERRegulation of L-glutamate import across plasma membrane →+0.274+1.797<.001<.001311
LUNG_NSCLC_LUSCRegulation of Fc receptor mediated stimulatory signaling pathway →+0.155+1.174<.001<.001311
LIVERIntestinal lipid absorption →+0.365+1.573.002.004311
BONESynaptic vesicle lumen acidification →+0.141+1.242.002.004310
BREASTRegulation of macrophage fusion →+0.147+1.138.004.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,803 associations by consensus.

Negative regulation of protein localization to centrosome by SDCBP expression — LUNG_SCLC

Box plot of Negative regulation of protein localization to centrosome in SDCBP-low vs SDCBP-high samples in LUNG_SCLC.

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Exploration