SCUBE2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCUBE2 mutation is significantly associated with the total protein of many other genes, with 50 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCUBE2-associated genes across cancer lineages are ASNS, ATM, and FASN. Each is linked with SCUBE2 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCUBE2-to-partner and partner-to-SCUBE2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by SCUBE2-low versus SCUBE2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCUBE2→partner) and Y-score (partner→SCUBE2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.279+1.662.013.01034
COADATM →-0.558-3.169.001.01733
COADFASN →+0.639+3.169<.001.01832
UCECMEK1 →+0.329+2.247.003.00132
COADPKC-b-II_pS660 →-0.427-3.169.007.01832
COADStathmin →+0.142+2.820.040.03532
Each partner links to its Q-omics profile. Showing the 6 strongest of 50 associations by consensus.

ASNS by SCUBE2 expression — UCEC

Box plot of ASNS in SCUBE2-low vs SCUBE2-high samples in UCEC.

Explore this box plot interactively →

Exploration