SCRT1

Across TCGA cell cohorts, SCRT1 RNA expression is significantly associated with the RNA expression of many other genes, with 4,049 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible SCRT1-associated genes across cancer lineages are NTN3, ZFP41, and C17orf100. Each is linked with SCRT1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SCRT1-to-partner and partner-to-SCRT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCRT1 versus NTN3 in LUNG_SCLC, with a Pearson correlation of 0.49.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCRT1→partner) and Y-score (partner→SCRT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	NTN3 →	+1.272	+1.704	<.001	<.001	3	5
BREAST	ZFP41 →	+1.912	+0.152	<.001	<.001	2	6
UPPER_AERODIGESTIVE_TRACT	C17orf100 →	+0.871	+0.049	<.001	<.001	3	5
LUNG_SCLC	APC2 →	+1.752	+1.438	<.001	.001	3	4
UPPER_AERODIGESTIVE_TRACT	MAP11 →	+1.025	+0.028	<.001	<.001	3	4
PANCREAS	SCNN1D →	+1.274	+0.058	<.001	<.001	2	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,049 associations by consensus.

SCRT1 vs NTN3 — LUNG_SCLC

Explore this scatter interactively →