SCN2B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCN2B mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCN2B-associated genes across cancer lineages are STAT3_pY705, EGFR_pY1068, and EGFR_pY1173. Each is linked with SCN2B in more than 1 cancer types. Because this analysis shows association rather than direction, both SCN2B-to-partner and partner-to-SCN2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, STAT3_pY705 grouped by SCN2B-low versus SCN2B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCN2B→partner) and Y-score (partner→SCN2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSTAT3_pY705 →-0.484-3.000<.001.00132
UCECEGFR_pY1068 →-0.338-2.321.001.00631
UCECEGFR_pY1173 →+0.071+1.833.031.01631
UCECGAPDH →+0.536+1.807.015.02731
UCECGATA6 →-0.170-2.584.007.01031
UCECJNK2 →+0.296+2.469<.001.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

STAT3_pY705 by SCN2B expression — UCEC

Box plot of STAT3_pY705 in SCN2B-low vs SCN2B-high samples in UCEC.

Explore this box plot interactively →

Exploration