SCGB1D4

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SCGB1D4 RNA expression is significantly associated with the mutation status of many other genes, with 78 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible SCGB1D4-associated genes across cancer lineages are PLXNA3, ERBIN, and KANSL1. Each is linked with SCGB1D4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCGB1D4-to-partner and partner-to-SCGB1D4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB1D4→partner) and Y-score (partner→SCGB1D4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYPLXNA3 →+4.222+0.078.006<.00132
BREASTERBIN →+5.169+0.130.005.00431
BREASTKANSL1 →+5.169+0.275.005<.00131
BREASTKIAA1217 →+5.169+0.130.005.00431
BREASTHEATR5A →+5.169+0.275.005<.00131
BREASTBRD4 →+3.432+0.113.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 78 associations by consensus.

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