SCGB1C1

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SCGB1C1 RNA expression is significantly associated with the RNA expression of many other genes, with 435 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SCGB1C1-associated genes across cancer lineages are SCGB1C2, PRR23D2, and CD300LD. Each is linked with SCGB1C1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCGB1C1-to-partner and partner-to-SCGB1C1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCGB1C1→partner) and Y-score (partner→SCGB1C1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSSCGB1C2 →+0.136+0.274<.001<.00134
UPPER_AERODIGESTIVE_TRACTPRR23D2 →+0.109+0.024<.001.00732
CNSCD300LD →+0.025+0.336<.001<.00132
CNSOR11A1 →+0.007+0.181.003<.00132
CNSOR2W1 →+0.015+0.212<.001.00132
CNSPAPOLB →+0.069+0.118<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 435 associations by consensus.

Exploration