SCD5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SCD5 mutation is significantly associated with the RNA expression of many other genes, with 1,643 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCD5-associated genes across cancer lineages are RN7SKP295, CSTF2, and CDR2L. Each is linked with SCD5 in more than 2 cancer types. Because this analysis shows association rather than direction, both SCD5-to-partner and partner-to-SCD5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP295 grouped by SCD5-low versus SCD5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCD5→partner) and Y-score (partner→SCD5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SKP295 →+0.260+2.863<.001.00133
SKCMCSTF2 →+0.620+3.341.001.00532
SKCMCDR2L →+1.024+3.353.004.00532
SKCMHAUS2 →+0.750+3.220.002.00932
SKCMFEM1C →+0.850+3.217<.001.00932
SKCMMTMR12 →+0.747+3.182.006.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,643 associations by consensus.

RN7SKP295 by SCD5 expression — UCEC

Box plot of RN7SKP295 in SCD5-low vs SCD5-high samples in UCEC.

Explore this box plot interactively →

Exploration