Across TCGA patient cohorts, SCART1 mutation is significantly associated with the RNA expression of many other genes, with 3,598 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SCART1-associated genes across cancer lineages are SNORA59B, XKRYP1, and DPP10-AS1. Each is linked with SCART1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SCART1-to-partner and partner-to-SCART1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCART1→partner) and Y-score (partner→SCART1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SNORA59B →	+0.130	+1.408	.007	.006	3	2
ESCA	XKRYP1 →	+0.062	+5.247	<.001	.006	3	1
CESC	DPP10-AS1 →	+1.098	+4.503	<.001	.005	3	1
CESC	LINC01519 →	+0.018	+4.669	.004	.007	3	1
CESC	RN7SL538P →	+0.091	+4.539	<.001	.008	3	1
CESC	RN7SL415P →	+0.110	+4.812	<.001	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,598 associations by consensus.

Exploration

SCART1 survival (RNA) · tumor vs normal (RNA) · all SCART1 data types