SCARNA9

Across TCGA patient cohorts, SCARNA9 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,742 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SCARNA9-associated proteins across cancer lineages are FAM76B_S193, CD163, and NCF1. Each is linked with SCARNA9 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCARNA9-to-partner and partner-to-SCARNA9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARNA9 versus FAM76B_S193 in HNSC, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA9→partner) and Y-score (partner→SCARNA9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	FAM76B_S193 →	+0.378	+0.977	<.001	<.001	3	4
GBM	CD163 →	-1.005	-0.734	<.001	<.001	3	3
GBM	NCF1 →	-0.753	-0.738	<.001	<.001	3	3
GBM	NXF1 →	+0.364	+0.660	<.001	<.001	3	3
LSCC	PPIG →	+0.240	+0.661	.004	<.001	3	3
GBM	RBM10 →	+0.194	+0.518	.003	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,742 associations by consensus.

SCARNA9 vs FAM76B_S193 — HNSC

Explore this scatter interactively →