SCARNA23

Across TCGA patient cohorts, SCARNA23 RNA expression is significantly associated with the RNA expression of many other genes, with 5,972 significant associations in total. LAML shows the largest number of these associations.

The most reproducible SCARNA23-associated genes across cancer lineages are SNORA58, POLA1, and SNORA71C. Each is linked with SCARNA23 in more than 13 cancer types. Because this analysis shows association rather than direction, both SCARNA23-to-partner and partner-to-SCARNA23 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARNA23 versus SNORA58 in LUAD, with a Pearson correlation of 0.67.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA23→partner) and Y-score (partner→SCARNA23) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SNORA58 →	+0.613	+0.249	<.001	<.001	3	13
SARC	POLA1 →	+0.826	+0.210	<.001	<.001	3	12
LUAD	SNORA71C →	+0.937	+0.320	<.001	.001	3	12
ESCA	ATAD5 →	+0.617	+0.356	<.001	.001	3	12
SARC	FANCB →	+0.578	+0.151	<.001	<.001	3	12
LAML	DDX50P1 →	+0.506	+0.681	.002	.002	1	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,972 associations by consensus.

SCARNA23 vs SNORA58 — LUAD

Explore this scatter interactively →