SCARNA1

Across TCGA patient cohorts, SCARNA1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,846 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SCARNA1-associated proteins across cancer lineages are ZMYM4, PIK3R5_S507, and TMEM201. Each is linked with SCARNA1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SCARNA1-to-partner and partner-to-SCARNA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCARNA1 versus ZMYM4 in GBM, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCARNA1→partner) and Y-score (partner→SCARNA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ZMYM4 →	+0.239	+0.441	<.001	<.001	3	4
CCRCC	PIK3R5_S507 →	-0.515	-0.611	.002	.009	3	4
UCEC	TMEM201 →	+0.506	+1.177	<.001	<.001	3	4
HNSC	PGAM1 →	-0.592	-1.494	<.001	.001	3	4
LSCC	ARPC5 →	-0.219	-0.796	<.001	<.001	3	4
GBM	SKAP2 →	-0.501	-0.518	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,846 associations by consensus.

SCARNA1 vs ZMYM4 — GBM

Explore this scatter interactively →