SCAF11

Across TCGA patient cohorts, SCAF11 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,026 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SCAF11-associated proteins across cancer lineages are MYG1, ARID2, and SCAF11_S338. Each is linked with SCAF11 in more than 4 cancer types. Because this analysis shows association rather than direction, both SCAF11-to-partner and partner-to-SCAF11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCAF11 versus MYG1 in LSCC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SCAF11→partner) and Y-score (partner→SCAF11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MYG1 →	+0.288	+0.467	<.001	<.001	3	5
HNSC	ARID2 →	+0.246	+0.530	.003	.003	3	4
LSCC	SCAF11_S338 →	+0.415	+0.328	.001	.003	3	4
COAD	LRPPRC →	-0.430	-0.436	<.001	<.001	3	4
BRCA	CAND1 →	+0.229	+0.421	<.001	.002	3	4
GBM	SP1 →	+0.324	+0.338	.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,026 associations by consensus.

SCAF11 vs MYG1 — LSCC

Explore this scatter interactively →