SBK2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SBK2 mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SBK2-associated genes across cancer lineages are OR10R2, IFNG, and SPATA19. Each is linked with SBK2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SBK2-to-partner and partner-to-SBK2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SBK2→partner) and Y-score (partner→SBK2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOR10R2 →+0.031+4.977<.001.00732
BLOOD_LeukemiaIFNG →+0.233+4.152<.001.00931
BLOOD_LeukemiaSPATA19 →+0.022+5.569<.001.00131
BLOOD_LeukemiaWFDC12 →+0.244+4.874<.001.00231
BLOOD_LeukemiaOR6B3 →+0.016+4.539<.001.00731
BLOOD_LeukemiaTRIM49B →+0.158+4.874<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

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