SAXO2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAXO2 mutation is significantly associated with the RNA expression of many other genes, with 3,257 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SAXO2-associated genes across cancer lineages are RNA5SP412, TCP11X3P, and RNA5SP415. Each is linked with SAXO2 in more than 1 cancer types. Because this analysis shows association rather than direction, both SAXO2-to-partner and partner-to-SAXO2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAXO2→partner) and Y-score (partner→SAXO2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP412 →+0.586+1.797<.001.00532
UCECTCP11X3P →+0.171+1.672.005.00432
UCECRNA5SP415 →+0.513+2.048<.001.00332
SKCMUSP12PY →+0.032+3.695.006.00932
SKCMATP13A5-AS1 →+1.312+3.913<.001.00731
SKCMRN7SL794P →+0.143+3.801.008.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,257 associations by consensus.

Exploration