SAMMSON

Across TCGA patient cohorts, SAMMSON RNA expression is significantly associated with the RNA expression of many other genes, with 12,660 significant associations in total. UVM shows the largest number of these associations.

The most reproducible SAMMSON-associated genes across cancer lineages are UQCRHP4, MIB1, and BCL9. Each is linked with SAMMSON in more than 18 cancer types. Because this analysis shows association rather than direction, both SAMMSON-to-partner and partner-to-SAMMSON results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAMMSON versus UQCRHP4 in SKCM, with a Pearson correlation of 0.80.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMMSON→partner) and Y-score (partner→SAMMSON) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	UQCRHP4 →	+1.326	+1.586	<.001	<.001	3	19
UVM	MIB1 →	+1.240	+0.533	<.001	<.001	3	19
SARC	BCL9 →	+0.759	+0.221	<.001	<.001	3	19
UVM	ZNF507 →	+0.827	+0.560	<.001	<.001	3	19
UVM	PAQR3 →	+0.573	+0.406	<.001	<.001	3	19
UVM	TUG1 →	+0.868	+0.658	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,660 associations by consensus.

SAMMSON vs UQCRHP4 — SKCM

Explore this scatter interactively →