SAMD11

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SAMD11 protein abundance is significantly associated with the RNA expression of many other genes, with 407 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SAMD11-associated genes across cancer lineages are MAPK1, SLC25A1, and SNU13. Each is linked with SAMD11 in more than 1 cancer types. Because this analysis shows association rather than direction, both SAMD11-to-partner and partner-to-SAMD11 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD11→partner) and Y-score (partner→SAMD11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAPK1 →-0.504-0.585.009.00831
UCECSLC25A1 →-1.463-0.621.004.00431
UCECSNU13 →-0.878-0.727.003.00531
UCECTTLL12 →-1.320-0.781.007.00931
UCECPYGL →-1.038-1.084.007.00131
UCECLRRC74A →+0.785+0.726<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 407 associations by consensus.

Exploration