SAMD1

Across TCGA patient cohorts, SAMD1 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,272 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SAMD1-associated proteins across cancer lineages are PDS5A_T1208, SF3B3, and FEN1. Each is linked with SAMD1 in more than 7 cancer types. Because this analysis shows association rather than direction, both SAMD1-to-partner and partner-to-SAMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAMD1 versus PDS5A_T1208 in BRCA, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD1→partner) and Y-score (partner→SAMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PDS5A_T1208 →	+0.578	+0.413	<.001	<.001	3	8
GBM	SF3B3 →	+0.278	+0.569	<.001	<.001	3	7
BRCA	FEN1 →	+0.601	+0.714	<.001	<.001	3	7
PDAC	SNRPD3 →	+0.300	+0.291	.003	<.001	3	6
BRCA	KIFC1 →	+0.656	+0.666	<.001	<.001	3	6
BRCA	THOC2 →	+0.315	+0.643	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,272 associations by consensus.

SAMD1 vs PDS5A_T1208 — BRCA

Explore this scatter interactively →