SAMD1

Across TCGA patient cohorts, SAMD1 protein abundance is significantly associated with the RNA expression of many other genes, with 16,305 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SAMD1-associated genes across cancer lineages are HELLS, DNA2, and TAF5. Each is linked with SAMD1 in more than 5 cancer types. Because this analysis shows association rather than direction, both SAMD1-to-partner and partner-to-SAMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAMD1 versus HELLS in LSCC, with a Pearson correlation of 0.63.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD1→partner) and Y-score (partner→SAMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	HELLS →	+0.926	+0.380	<.001	<.001	3	6
HNSC	DNA2 →	+0.903	+0.342	<.001	<.001	3	6
LSCC	TAF5 →	+0.534	+0.409	<.001	<.001	3	6
OV	ZBTB12 →	+0.859	+0.383	.001	.002	3	6
HNSC	PRC1-AS1 →	+0.621	+0.455	<.001	<.001	3	6
LSCC	ILF3 →	+0.631	+0.414	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,305 associations by consensus.

SAMD1 vs HELLS — LSCC

Explore this scatter interactively →