SAMD1

Across TCGA cell cohorts, SAMD1 RNA expression is significantly associated with the RNA expression of many other genes, with 11,279 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SAMD1-associated genes across cancer lineages are RAVER1, CHERP, and PAGR1. Each is linked with SAMD1 in more than 18 cancer types. Because this analysis shows association rather than direction, both SAMD1-to-partner and partner-to-SAMD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAMD1 versus RAVER1 in BLOOD_Lymphoma, with a Pearson correlation of 0.66.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAMD1→partner) and Y-score (partner→SAMD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Lymphoma	RAVER1 →	+1.538	+1.284	<.001	<.001	3	19
UPPER_AERODIGESTIVE_TRACT	CHERP →	+1.107	+1.163	<.001	<.001	3	18
LUNG_NSCLC_LUSC	PAGR1 →	+1.122	+1.401	<.001	<.001	3	17
STOMACH	TNPO2 →	+0.998	+1.056	<.001	.003	2	18
PANCREAS	UBTF →	+1.086	+1.136	<.001	<.001	3	17
BLOOD_Lymphoma	MED26 →	+0.879	+1.072	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,279 associations by consensus.

SAMD1 vs RAVER1 — BLOOD_Lymphoma

Explore this scatter interactively →