SALL4

Across TCGA cell cohorts, SALL4 RNA expression is significantly associated with the RNA expression of many other genes, with 6,467 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SALL4-associated genes across cancer lineages are ZFP64, RBM4B, and PRPF39. Each is linked with SALL4 in more than 8 cancer types. Because this analysis shows association rather than direction, both SALL4-to-partner and partner-to-SALL4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SALL4 versus ZFP64 in OVARY, with a Pearson correlation of 0.57.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SALL4→partner) and Y-score (partner→SALL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	ZFP64 →	+1.135	+2.153	<.001	<.001	2	9
UPPER_AERODIGESTIVE_TRACT	RBM4B →	+0.923	+1.674	<.001	.001	3	5
OESOPHAGUS	PRPF39 →	+0.941	+2.490	.003	.001	3	5
BREAST	ATP9A →	+1.605	+1.209	.001	.001	2	6
SOFT_TISSUE	KIRREL2 →	+1.746	+1.747	.003	.003	3	4
PANCREAS	PGAP4 →	+1.892	+1.717	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,467 associations by consensus.

SALL4 vs ZFP64 — OVARY

Explore this scatter interactively →