SAA2-SAA4

Across TCGA patient cohorts, SAA2-SAA4 RNA expression is significantly associated with the RNA expression of many other genes, with 9,798 significant associations in total. BLCA shows the largest number of these associations.

The most reproducible SAA2-SAA4-associated genes across cancer lineages are SAA1, SAA2, and SAA4. Each is linked with SAA2-SAA4 in more than 31 cancer types. Because this analysis shows association rather than direction, both SAA2-SAA4-to-partner and partner-to-SAA2-SAA4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SAA2-SAA4 versus SAA1 in LIHC, with a Pearson correlation of 0.96.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SAA2-SAA4→partner) and Y-score (partner→SAA2-SAA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIHC	SAA1 →	+5.484	+4.606	<.001	<.001	3	32
LIHC	SAA2 →	+5.154	+4.563	<.001	<.001	3	31
CHOL	SAA4 →	+3.643	+3.068	<.001	<.001	3	29
SCLC	CFB →	+2.076	+0.594	<.001	<.001	3	27
LIHC	NNMT →	+2.859	+3.007	<.001	<.001	3	24
UCS	C3 →	+3.058	+1.259	<.001	.008	1	26

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,798 associations by consensus.

SAA2-SAA4 vs SAA1 — LIHC

Explore this scatter interactively →