S1PR4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, S1PR4 mutation is significantly associated with the RNA expression of many other genes, with 3,204 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible S1PR4-associated genes across cancer lineages are FANCC, NDEL1, and MINPP1. Each is linked with S1PR4 in more than 2 cancer types. Because this analysis shows association rather than direction, both S1PR4-to-partner and partner-to-S1PR4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FANCC grouped by S1PR4-low versus S1PR4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (S1PR4→partner) and Y-score (partner→S1PR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFANCC →+0.502+3.000.001.00133
UCECNDEL1 →+0.503+3.700<.001.00133
UCECMINPP1 →+0.668+3.470.002.00233
SKCMXPNPEP1 →+0.692+3.366<.001.00533
UCECARHGAP19 →+0.677+4.098<.001<.00133
UCECDLAT →+0.759+4.087<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,204 associations by consensus.

FANCC by S1PR4 expression — UCEC

Box plot of FANCC in S1PR4-low vs S1PR4-high samples in UCEC.

Explore this box plot interactively →

Exploration