RUSC1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RUSC1 mutation is significantly associated with the RNA expression of many other genes, with 280 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RUSC1-associated genes across cancer lineages are SIGLEC8, OR5M11, and OR10R2. Each is linked with RUSC1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RUSC1-to-partner and partner-to-RUSC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SIGLEC8 grouped by RUSC1-low versus RUSC1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RUSC1→partner) and Y-score (partner→RUSC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINESIGLEC8 →+0.006+2.345.002.00732
LARGE_INTESTINEOR5M11 →+0.057+2.680.009.00132
BLOOD_LeukemiaOR10R2 →+1.639+3.966<.001.00132
PANCREASACSM2A →+0.022+5.000<.001.00631
LARGE_INTESTINEHMGXB4 →+0.524+3.237.006.00331
LARGE_INTESTINEMAZ →+0.537+2.451.009.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 280 associations by consensus.

SIGLEC8 by RUSC1 expression — LARGE_INTESTINE

Box plot of SIGLEC8 in RUSC1-low vs RUSC1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration