RUBCN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RUBCN mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RUBCN-associated genes across cancer lineages are RAD51, PCNA, and AMPK_pT172. Each is linked with RUBCN in more than 2 cancer types. Because this analysis shows association rather than direction, both RUBCN-to-partner and partner-to-RUBCN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RAD51 grouped by RUBCN-low versus RUBCN-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RUBCN→partner) and Y-score (partner→RUBCN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRAD51 →+0.218+2.178.003.03523
UCECPCNA →+0.144+1.502.026.02732
UCECAMPK_pT172 →+0.272+3.584.028.00232
UCECChk2_pT68 →-0.140-2.492.012.00132
UCECCyclin-B1 →+0.557+1.999<.001.00832
COADTFRC →+0.601+3.347.016.00522
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

RAD51 by RUBCN expression — COAD

Box plot of RAD51 in RUBCN-low vs RUBCN-high samples in COAD.

Explore this box plot interactively →

Exploration