RTN4R

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RTN4R RNA expression is significantly associated with the RNA expression of many other genes, with 17,893 significant associations in total. ACC shows the largest number of these associations.

The most reproducible RTN4R-associated genes across cancer lineages are RHBDD3, HIRA, and ESS2. Each is linked with RTN4R in more than 29 cancer types. Because this analysis shows association rather than direction, both RTN4R-to-partner and partner-to-RTN4R results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTN4R versus RHBDD3 in ACC, with a Pearson correlation of 0.53.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN4R→partner) and Y-score (partner→RTN4R) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ACCRHBDD3 →+0.977+1.611<.001<.001330
ACCHIRA →+0.628+1.366<.001<.001329
LUSCESS2 →+0.599+0.963<.001<.001329
TGCTKLHL22 →+0.761+0.466<.001<.001329
LAMLZNF219 →+0.996+1.648<.001<.001328
UCSADGRB2 →+1.910+1.490<.001<.001328
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,893 associations by consensus.

RTN4R vs RHBDD3 — ACC

Per-sample scatter of RTN4R vs RHBDD3 in ACC (Pearson r = 0.53).

Explore this scatter interactively →

Exploration