RTN1

Across TCGA cell cohorts, RTN1 RNA expression is significantly associated with the RNA expression of many other genes, with 5,937 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible RTN1-associated genes across cancer lineages are RTL5, ABI2, and CACNA2D1. Each is linked with RTN1 in more than 5 cancer types. Because this analysis shows association rather than direction, both RTN1-to-partner and partner-to-RTN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTN1 versus RTL5 in STOMACH, with a Pearson correlation of 0.88.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RTN1→partner) and Y-score (partner→RTN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	RTL5 →	+2.185	+1.964	<.001	<.001	3	6
STOMACH	ABI2 →	+1.320	+1.756	.003	.002	3	6
LUNG_SCLC	CACNA2D1 →	+1.619	+2.725	<.001	<.001	2	6
BREAST	TBC1D19 →	+1.356	+1.964	<.001	.001	3	5
LUNG_SCLC	KIF5C →	+2.433	+2.513	<.001	<.001	3	5
LUNG_NSCLC_LUAD	SGCB →	+1.613	+0.580	<.001	.002	2	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,937 associations by consensus.

RTN1 vs RTL5 — STOMACH

Explore this scatter interactively →