RTL3

Across TCGA patient cohorts, RTL3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,959 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RTL3-associated proteins across cancer lineages are MSRB3, VCL_S346, and ASPN. Each is linked with RTL3 in more than 8 cancer types. Because this analysis shows association rather than direction, both RTL3-to-partner and partner-to-RTL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RTL3 versus MSRB3 in BRCA, with a Pearson correlation of 0.50.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RTL3→partner) and Y-score (partner→RTL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	MSRB3 →	+0.698	+0.276	<.001	<.001	3	9
BRCA	VCL_S346 →	+0.625	+0.205	<.001	<.001	3	8
OV	ASPN →	+1.019	+0.310	<.001	<.001	3	8
OV	ACTN1 →	+0.499	+0.320	<.001	<.001	3	8
CCRCC	CLEC3B →	+0.680	+0.165	<.001	<.001	3	8
OV	CNN2 →	+0.908	+0.400	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,959 associations by consensus.

RTL3 vs MSRB3 — BRCA

Explore this scatter interactively →