RTL3

Across TCGA cell cohorts, RTL3 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,371 significant associations in total. BONE shows the largest number of these associations.

The most reproducible RTL3-associated GO terms across cancer lineages are Positive regulation of cell-substrate junction organization, Negative regulation of dendritic cell apoptotic process, and Collagen fibril organization. Each is linked with RTL3 in more than 7 cancer types. Because this analysis shows association rather than direction, both RTL3-to-partner and partner-to-RTL3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of cell-substrate junction organization grouped by RTL3-low versus RTL3-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RTL3→partner) and Y-score (partner→RTL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Positive regulation of cell-substrate junction organization →	+0.219	+0.909	<.001	.002	3	8
BONE	Negative regulation of dendritic cell apoptotic process →	+1.866	+0.907	<.001	.002	3	8
BONE	Collagen fibril organization →	+0.524	+1.147	<.001	.002	3	8
BONE	Collagen metabolic process →	+0.215	+0.616	<.001	.005	3	8
BONE	Positive regulation of focal adhesion assembly →	+0.260	+0.906	<.001	.002	3	8
BONE	Response to activity →	+0.079	+0.616	<.001	.005	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,371 associations by consensus.

Positive regulation of cell-substrate junction organization by RTL3 expression — BONE

Explore this box plot interactively →