RSPH4A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RSPH4A mutation is significantly associated with the RNA expression of many other genes, with 929 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RSPH4A-associated genes across cancer lineages are FIGLA, ACSM2A, and SUPT20HL1. Each is linked with RSPH4A in more than 1 cancer types. Because this analysis shows association rather than direction, both RSPH4A-to-partner and partner-to-RSPH4A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FIGLA grouped by RSPH4A-low versus RSPH4A-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RSPH4A→partner) and Y-score (partner→RSPH4A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYFIGLA →+0.130+4.029.001.00931
OVARYACSM2A →+0.045+4.029.006.00931
OVARYSUPT20HL1 →+0.092+4.807<.001.00331
LUNG_NSCLC_LUADTDRD15 →+0.351+5.149<.001<.00131
LUNG_NSCLC_LUADOR8B4 →+0.032+4.472<.001.00131
LARGE_INTESTINEGGA1 →+0.492+2.158.009.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 929 associations by consensus.

FIGLA by RSPH4A expression — OVARY

Box plot of FIGLA in RSPH4A-low vs RSPH4A-high samples in OVARY.

Explore this box plot interactively →

Exploration