RRAGC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RRAGC protein abundance is significantly associated with the RNA expression of many other genes, with 22,404 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RRAGC-associated genes across cancer lineages are MAP7D1, RASGRP4, and SNX10. Each is linked with RRAGC in more than 3 cancer types. Because this analysis shows association rather than direction, both RRAGC-to-partner and partner-to-RRAGC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RRAGC versus MAP7D1 in COAD, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RRAGC→partner) and Y-score (partner→RRAGC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMAP7D1 →+0.520+0.147.002.00634
LUADRASGRP4 →+0.448+0.209<.001<.00134
UCECSNX10 →+0.958+0.166<.001.00234
LUADCASS4 →+0.598+0.207<.001<.00134
OVNEIL2 →-0.647-0.363.002<.00134
HNSCH2AC21 →-0.978-0.262.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,404 associations by consensus.

RRAGC vs MAP7D1 — COAD

Per-sample scatter of RRAGC vs MAP7D1 in COAD (Pearson r = 0.27).

Explore this scatter interactively →

Exploration