RRAGA

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RRAGA RNA expression is significantly associated with the RNA expression of many other genes, with 18,987 significant associations in total. UVM shows the largest number of these associations.

The most reproducible RRAGA-associated genes across cancer lineages are VCP, KLHL9, and CDC37L1. Each is linked with RRAGA in more than 33 cancer types. Because this analysis shows association rather than direction, both RRAGA-to-partner and partner-to-RRAGA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RRAGA versus VCP in ACC, with a Pearson correlation of 0.82.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RRAGA→partner) and Y-score (partner→RRAGA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ACCVCP →+0.931+0.966<.001<.001334
DLBCKLHL9 →+1.330+0.798<.001<.001334
ACCCDC37L1 →+0.989+1.098<.001<.001334
ACCSMU1 →+1.014+0.977<.001<.001334
DLBCSNAPC3 →+1.001+0.650<.001<.001333
DLBCTLN1 →+1.297+0.868<.001<.001333
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,987 associations by consensus.

RRAGA vs VCP — ACC

Per-sample scatter of RRAGA vs VCP in ACC (Pearson r = 0.82).

Explore this scatter interactively →

Exploration