RPS3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPS3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,835 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RPS3-associated proteins across cancer lineages are URB1, CMSS1, and GNL3. Each is linked with RPS3 in more than 4 cancer types. Because this analysis shows association rather than direction, both RPS3-to-partner and partner-to-RPS3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPS3 versus URB1 in LSCC, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS3→partner) and Y-score (partner→RPS3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCURB1 →+0.315+0.506<.001<.00135
LSCCCMSS1 →+0.538+0.523<.001<.00135
LSCCGNL3 →+0.397+0.485<.001<.00135
GBMNOC3L →+0.371+0.327.002.00135
LSCCUTP3 →+0.371+0.495<.001<.00134
GBMBMS1 →+0.283+0.318<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,835 associations by consensus.

RPS3 vs URB1 — LSCC

Per-sample scatter of RPS3 vs URB1 in LSCC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration