RPS20

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPS20 protein abundance is significantly associated with the RNA expression of many other genes, with 8,757 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RPS20-associated genes across cancer lineages are LILRA1, CSF3R, and LILRB3. Each is linked with RPS20 in more than 4 cancer types. Because this analysis shows association rather than direction, both RPS20-to-partner and partner-to-RPS20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPS20 versus LILRA1 in OV, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPS20→partner) and Y-score (partner→RPS20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVLILRA1 →-0.381-0.296.008.00235
HNSCCSF3R →-1.154-0.573<.001<.00135
LSCCLILRB3 →-0.697-0.197<.001<.00135
COADPELATON →-0.715-0.225<.001<.00135
PDACMEFV →-0.724-0.427<.001<.00134
LSCCTREM1 →-1.147-0.187<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,757 associations by consensus.

RPS20 vs LILRA1 — OV

Per-sample scatter of RPS20 vs LILRA1 in OV (Pearson r = -0.40).

Explore this scatter interactively →

Exploration