RPRD1B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RPRD1B protein abundance is significantly associated with the RNA expression of many other genes, with 15,204 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RPRD1B-associated genes across cancer lineages are DHX35, RBM39, and GID8. Each is linked with RPRD1B in more than 8 cancer types. Because this analysis shows association rather than direction, both RPRD1B-to-partner and partner-to-RPRD1B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RPRD1B versus DHX35 in OV, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RPRD1B→partner) and Y-score (partner→RPRD1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVDHX35 →+0.772+0.490<.001<.00139
GBMRBM39 →+0.558+0.510<.001<.00139
OVGID8 →+0.584+0.430<.001<.00138
OVACTR5 →+0.580+0.475<.001<.00138
COADUCKL1 →+0.678+0.377<.001<.00138
COADPCIF1 →+0.676+0.238<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,204 associations by consensus.

RPRD1B vs DHX35 — OV

Per-sample scatter of RPRD1B vs DHX35 in OV (Pearson r = 0.46).

Explore this scatter interactively →

Exploration