RPP38-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RPP38-DT RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of RPP38-DT’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where RPP38-DT RNA is repressed in tumor relative to normal tissue. In most cancer types RPP38-DT is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KICH, THCA, and KIRC are the cancer types where RPP38-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RPP38-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll−0.443<.00110view →
THCAFemaleAll−0.508<.0017view →
KIRCMaleII,III,IV−0.112<.0017view →
COADAllII,III,IV+0.205.0016view →
BRCAFemaleAll−0.199<.0016view →
LIHCAllAll+0.116<.0015view →
STADMaleAll+0.218<.0014view →
LUADFemaleII,III,IV−0.269.0053view →
LUADAllIV+0.490.0132view →
CHOLAllAll+0.453<.0012view →
KIRPAllIV+0.272.0252view →
PRADAllAll+0.200.0032view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

RPP38-DT–KICH

Tumor-vs-normal expression box plot for RPP38-DT RNA in KICH.

Open the KICH breakdown →

Exploration