Across TCGA patient cohorts, RP9P RNA expression is significantly associated with the protein abundance of many other proteins, with 17,229 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RP9P-associated proteins across cancer lineages are PRKCH_S317, MSH6, and DENND2D. Each is linked with RP9P in more than 5 cancer types. Because this analysis shows association rather than direction, both RP9P-to-partner and partner-to-RP9P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RP9P→partner) and Y-score (partner→RP9P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PRKCH_S317 →	-0.476	-0.476	<.001	<.001	3	6
HNSC	MSH6 →	+0.445	+0.623	<.001	<.001	3	6
BRCA	DENND2D →	-0.469	-0.651	<.001	.002	3	6
GBM	SSB →	+0.301	+0.650	.001	<.001	3	6
GBM	CHCHD2 →	+0.473	+0.512	.006	.001	3	6
OV	FKBP9 →	+0.413	+0.559	.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,229 associations by consensus.

Exploration

RP9P survival (RNA) · tumor vs normal (RNA) · all RP9P data types