ROPN1L

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ROPN1L mutation is significantly associated with the total protein of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ROPN1L-associated genes across cancer lineages are MSH2, ATM, and PCNA. Each is linked with ROPN1L in more than 1 cancer types. Because this analysis shows association rather than direction, both ROPN1L-to-partner and partner-to-ROPN1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSH2 grouped by ROPN1L-low versus ROPN1L-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ROPN1L→partner) and Y-score (partner→ROPN1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMSH2 →-0.341-2.973.004.03531
UCECATM →-0.556-3.321.019.01031
UCECPCNA →+0.261+3.321.021.01012
UCECp27_pT198 →+0.147+3.321.008.01011
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

MSH2 by ROPN1L expression — UCEC

Box plot of MSH2 in ROPN1L-low vs ROPN1L-high samples in UCEC.

Explore this box plot interactively →

Exploration