ROPN1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ROPN1 mutation is significantly associated with the total protein of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ROPN1-associated genes across cancer lineages are p62 Lck ligand, Caspase-8, and 14-3-3_beta. Each is linked with ROPN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ROPN1-to-partner and partner-to-ROPN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p62 Lck ligand grouped by ROPN1-low versus ROPN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ROPN1→partner) and Y-score (partner→ROPN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp62 Lck ligand →+0.522+2.662<.001<.00132
UCECCaspase-8 →-0.253-2.169.007.00332
UCEC14-3-3_beta →-0.133-2.301<.001.00531
UCECeEF2 →+0.312+1.415.020.04631
UCECEGFR_pY1068 →-0.305-2.906.001.00131
UCECeIF4E →+0.228+3.807.003<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

p62 Lck ligand by ROPN1 expression — UCEC

Box plot of p62 Lck ligand in ROPN1-low vs ROPN1-high samples in UCEC.

Explore this box plot interactively →

Exploration