RNU6-789P

Across TCGA patient cohorts, RNU6-789P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,583 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU6-789P-associated GO terms across cancer lineages are Regulation of DNA repair, Obsolete DNA methylation, and Alternative mRNA splicing, via spliceosome. Each is linked with RNU6-789P in more than 15 cancer types. Because this analysis shows association rather than direction, both RNU6-789P-to-partner and partner-to-RNU6-789P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by RNU6-789P-low versus RNU6-789P-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-789P→partner) and Y-score (partner→RNU6-789P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of DNA repair →	+0.055	+0.783	.001	<.001	3	16
KIRP	Obsolete DNA methylation →	+0.049	+0.083	<.001	<.001	3	16
ESCA	Alternative mRNA splicing, via spliceosome →	+0.056	+0.674	<.001	<.001	3	16
ESCA	Regulation of alternative mRNA splicing, via spliceosome →	+0.051	+0.582	<.001	<.001	3	16
STAD	Regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →	+0.057	+0.579	<.001	<.001	3	15
ESCA	Regulation of telomere maintenance via telomere lengthening →	+0.061	+0.759	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,583 associations by consensus.

Regulation of DNA repair by RNU6-789P expression — ESCA

Explore this box plot interactively →