RNU6-539P

Across TCGA patient cohorts, RNU6-539P RNA expression is significantly associated with the protein abundance of many other proteins, with 5,733 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible RNU6-539P-associated proteins across cancer lineages are EHMT2, TOP2B, and SMARCE1. Each is linked with RNU6-539P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU6-539P-to-partner and partner-to-RNU6-539P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU6-539P versus EHMT2 in LSCC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-539P→partner) and Y-score (partner→RNU6-539P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	EHMT2 →	+0.254	+0.543	.002	<.001	3	4
LSCC	TOP2B →	+0.261	+0.428	<.001	.001	3	4
LSCC	SMARCE1 →	+0.207	+0.486	.003	.001	3	3
GBM	ADNP →	+0.339	+0.655	.006	.007	3	3
LSCC	DEK →	+0.379	+0.592	<.001	<.001	3	3
GBM	MTA1 →	+0.385	+0.773	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,733 associations by consensus.

RNU6-539P vs EHMT2 — LSCC

Explore this scatter interactively →