Across TCGA patient cohorts, RNU6-39P RNA expression is significantly associated with the go_rna of many other GO terms, with 5,147 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible RNU6-39P-associated GO terms across cancer lineages are Midbrain development, RNA secondary structure unwinding, and Positive regulation of neuron projection development. Each is linked with RNU6-39P in more than 9 cancer types. Because this analysis shows association rather than direction, both RNU6-39P-to-partner and partner-to-RNU6-39P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-39P→partner) and Y-score (partner→RNU6-39P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUSC	Midbrain development →	+0.027	+0.098	<.001	<.001	3	9
UCEC	RNA secondary structure unwinding →	+0.038	+0.173	<.001	.005	1	10
STAD	Positive regulation of neuron projection development →	+0.023	+0.262	.002	<.001	3	8
ESCA	Chondrocyte differentiation →	+0.030	+0.345	.005	.001	2	9
STAD	Telencephalon development →	+0.022	+0.311	.003	<.001	3	8
ESCA	Regulation of signal transduction by p53 class mediator →	+0.038	+0.303	.001	.005	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,147 associations by consensus.

Exploration

RNU6-39P survival (RNA) · tumor vs normal (RNA) · all RNU6-39P data types