RNU6-1238P

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU6-1238P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,875 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible RNU6-1238P-associated GO terms across cancer lineages are Obsolete histone H3-K4 methylation, Negative regulation of gene expression, epigenetic, and Transcription initiation at RNA polymerase II promoter. Each is linked with RNU6-1238P in more than 28 cancer types. Because this analysis shows association rather than direction, both RNU6-1238P-to-partner and partner-to-RNU6-1238P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU6-1238P→partner) and Y-score (partner→RNU6-1238P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
DLBCObsolete histone H3-K4 methylation →+0.081+0.965<.001<.001329
DLBCNegative regulation of gene expression, epigenetic →+0.056+0.901<.001<.001329
DLBCTranscription initiation at RNA polymerase II promoter →+0.088+1.289<.001<.001329
DLBCObsolete histone modification →+0.070+1.066.001<.001329
DLBCPositive regulation of DNA-templated transcription initiation →+0.082+0.943<.001<.001328
DLBCRegulation of double-strand break repair →+0.073+1.338.002<.001328
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,875 associations by consensus.

Exploration